Chapter 3.12 References and further reading

Aime, M.C., Matheny, P.B., Henk, D.A., Frieders, E.M., Nilsson, R.H., Piepenbring, M., McLaughlin, D.J., Szabo, L.J., Begerow, D., Sampaio, J.P., Bauer, R., Weiss, M., Oberwinkler, F. & Hibbett, D. (2006). An overview of the higher level classification of Pucciniomycotina based on combined analyses of nuclear large and small subunit rDNA sequences. Mycologia, 98: 896-905.
DOI: http://dx.doi.org/10.3852/mycologia.98.6.896. CLICK HERE to download the full text.

Begerow, D., Stoll, M. & Bauer, R. (2006). A phylogenetic hypothesis of Ustilaginomycotina based on multiple gene analyses and morphological data. Mycologia, 98: 906-916. DOI: http://dx.doi.org/10.3852/mycologia.98.6.906. CLICK HERE to download the full text.

Binder, M. & Hibbett, D.S. (2006). Molecular systematics and biological diversification of Boletales. Mycologia, 98: 971-981. DOI: http://dx.doi.org/10.3852/mycologia.98.6.971. CLICK HERE to download the full text.

Blackwell, M., Hibbett, D.S., Taylor, J.W. & Spatafora, J.W. (2006). Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha). Mycologia, 98: 829-837. DOI: http://dx.doi.org/10.3852/mycologia.98.6.829. CLICK HERE to download the full text.

Bracker, C.E. (1968). The ultrastructure and development of sporangia in Gilbertella persicaria. Mycologia, 60: 1016-1067. DOI: http://dx.doi.org/10.2307/3757290.

Carlile, M. J., Watkinson, S. C. & Gooday, G. W. (2001). The Fungi, 2nd edn. Academic Press: London. ISBN 0127384464.

Gleason, F.H., Kagami, M., LeFevre, E. & Sime-Ngando, T. (2008). The ecology of chytrids in aquatic ecosystems: roles in food web dynamics. Fungal Biology Reviews, 22: 17-25. DOI: http://dx.doi.org/10.1016/j.fbr.2008.02.001. CLICK HERE to download the full text.

Hawksworth, D.L. (2001). The magnitude of fungal diversity: the 1.5 million species estimate revisited. Mycological Research, 105: 1422-1432. DOI: http://dx.doi.org/10.1017/S0953756201004725. CLICK HERE to download the complete text

Hibbett, D.S. (2006). A phylogenetic overview of the Agaricomycotina. Mycologia, 98: 917-925. http://www.mycologia.org/cgi/content/abstract/98/6/917. DOI: http://dx.doi.org/10.3852/mycologia.98.6.917. CLICK HERE to download the full text.

Hibbett, D.S., Bindera, M., Bischoff, J.F., Blackwell, M., Cannon, P.F. and 62 others (2007). A higher-level phylogenetic classification of the Fungi. Mycological Research, 111: 509-547. DOI: http://dx.doi.org/10.1016/j.mycres.2007.03.004. CLICK HERE to download the full text.

Hosaka, K., Bates, S.T., Beever, R.E., Castellano, M.A., Colgan, W., III, Dominguez, L.S., Nouhra, E.R., Geml, J., Giachini, A.J., Kenney, S.R., Simpson, N.B., Spatafora, J.W. & Trappe, J.M. (2006). Molecular phylogenetics of the gomphoid-phalloid fungi with an establishment of the new subclass Phallomycetidae and two new orders. Mycologia, 98: 949-959. DOI: http://dx.doi.org/10.3852/mycologia.98.6.949. CLICK HERE to download the full text.

James, T.Y., Letcher, P.M., Longcore, J.E., Mozley-Standridge, S.E., Porter, D., Powell, M.J., Griffith, G.W. & Vilgalys, R. (2006). A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota). Mycologia, 98: 860-871. DOI: http://dx.doi.org/10.3852/mycologia.98.6.860. CLICK HERE to download the full text.

Kavanagh, K. (2005). Fungi: Biology and Applications. Wiley, Chichester, UK. ISBN-10: 0470867019, ISBN-13: 978-0470867013.

Kendrick, B. (2000). The Fifth Kingdom, 3rd ed. Focus Publishing. ISBN-10: 1585100226, ISBN-13: 978-1585100224.

Landy, E.T. & Jones, G.M. (2006). What is the fungal diversity of marine ecosystems in Europe? Mycologist, 20: 15–21. DOI: http://dx.doi.org/10.1016/j.mycol.2005.11.010. CLICK HERE to download the full text.
 
Larsson, K.-H., Parmasto, E., Fischer, M., Langer, E., Nakasone, K.K. & Redhead, S.A. (2006). Hymenochaetales: a molecular phylogeny for the hymenochaetoid clade. Mycologia, 98: 926-936. DOI: http://dx.doi.org/10.3852/mycologia.98.6.926. CLICK HERE to download the full text.

Lessie, P.E. & Lovett, J.S. (1968). Ultrastructural changes during sporangium formation and zoospore differentiation in Blastocladiella emersonii. American Journal of Botany, 55: 220-236. Stable URL: http://links.jstor.org/sici?sici=0002­9122%28196802%2955%3A2%3C220%3AUCDSFA%3E2.0.CO%3B2-I. CLICK HERE to download the complete text.

Matheny, P.B., Curtis, J.M., Hofstetter, V., Aime, M.C., Moncalvo, J.-M., Ge, Z.-W., Yang, Z.-L., Slot, J.C., Ammirati, J.F., Baroni, T.J., Bougher, N.L., Hughes, K.W., Lodge, D.J., Kerrigan, R.W., Seidl, M.T., Aanen, D.K., DeNitis, M., Daniele, G.M., Desjardin, D.E., Kropp, B.R., Norvell, L.L., Parker, A., Vellinga, E.C., Vilgalys, R. & Hibbett, D.S. (2006). Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia, 98: 982-995. DOI: http://dx.doi.org/10.3852/mycologia.98.6.982. CLICK HERE to download the full text.

Mayden, R.L. (1997). A hierarchy of species concepts: the denouement in the saga of the species problem. In: Species: The Units of Biodiversity (M.F. Claridge, H.A. Dawah & M.R. Wilson, eds), pp. 381-424. ISBN-10: 0412631202, ISBN-13: 978-0412631207. Chapman and Hall: London.

Miller, S.L., Larsson, E., Larsson, K.-H., Verbeken, A. & Nuytinck, J. (2006). Perspectives in the new Russulales. Mycologia, 98: 960-970. DOI: http://dx.doi.org/10.3852/mycologia.98.6.960. CLICK HERE to download the full text.
 
Moncalvo, J.-M., Nilsson, R.H., Koster, B., Dunham, S.M., Bernauer, T., Matheny, P.B., Porter, T.M., Margaritescu, S., Weiss, M., Garnica, S., Danell, E., Langer, G., Langer, E., Larsson, E., Larsson, K.-H. & Vilgalys, R. (2006). The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods. Mycologia, 98: 937-948. DOI: http://dx.doi.org/10.3852/mycologia.98.6.937. CLICK HERE to download the full text.

Moore, D. (1998). Fungal Morphogenesis. Cambridge University Press: New York. 469 pp. ISBN-10: 0521552958, ISBN-13: 978-0521552950. Chapter 3 Metabolism and biochemistry of hyphal systems. CLICK HERE to download the full text.

Moore, D. (2000). Slayers, Saviors, Servants and Sex. An exposé of Kingdom Fungi. Springer Verlag, Inc.: New York. 176 pp. ISBN-10: 0387951016, ISBN-13: 978-0387951010. Chapter 3 Decay and Degradation. CLICK HERE to download the full text.

Moore, D. & Novak Frazer, L. (2002). Essential Fungal Genetics. Springer-Verlag Inc.: New York. ISBN-10: 0387953671, ISBN-13: 978-0387953670.

Pommerville, J.C., Strickland, J.B. & Harding, K.E. (1990). Pheromone interactions and ionic communication in gametes of aquatic fungus Allomyces macrogynus. Journal of Chemical Ecology, 16: 121-131. DOI: http://dx.doi.org/10.1007/BF01021274. CLICK HERE to download the complete text.

Redecker, D. & Raab, P. (2006). Phylogeny of the Glomeromycota (arbuscular mycorrhizal fungi): recent developments and new gene markers. Mycologia, 98: 885-895. DOI: http://dx.doi.org/10.3852/mycologia.98.6.885. CLICK HERE to download the full text.

Reeves, F. Jr. (1967). The fine structure of ascospore formation in Pyronema domesticum. Mycologia, 59: 1018-1033. DOI: http://dx.doi.org/10.2307/3757272.

Sexton, A.C. & Howlett, B.J. (2006). Parallels in fungal pathogenesis on plant and animal hosts. Eukaryotic Cell, 5: 1941-1949. DOI: http://dx.doi.org/10.1128/EC.00277-06. CLICK HERE to download the full text.

Sieber, T.N. (2007). Endophytic fungi in forest trees: are they mutualists? Fungal Biology Reviews, 21: 75-89. DOI: http://dx.doi.org/10.1016/j.fbr.2007.05.004. CLICK HERE to download the full text.

Spatafora, J.W., Sung, G.-H., Johnson, D., Hesse, C., O'Rourke, B., Serdani, M., Spotts, R., Lutzoni, F., Hofstetter, V., Miadlikowska, J., Reeb, V., Gueidan, C., Fraker, E., Lumbsch, T., Lucking, R., Schmitt, I., Hosaka, K., Aptroot, A., Roux, C., Miller, A.N., Geiser, D.M., Hafellner, J., Hestmark, G., Arnold, A.E., Budel, B., Rauhut, A., Hewitt, D., Untereiner, W.A., Cole, M.S., Scheidegger, C., Schultz, M., Sipman, H. & Schoch, C.L. (2006). A five-gene phylogeny of Pezizomycotina. Mycologia, 98: 1018-1028. DOI: http://dx.doi.org/10.3852/mycologia.98.6.1018. CLICK HERE to download the full text.

Sugiyama, J., Hosaka, K. & Suh, S.-O. (2006). Early diverging Ascomycota: phylogenetic divergence and related evolutionary enigmas. Mycologia, 98: 996-1005. DOI: http://dx.doi.org/10.3852/mycologia.98.6.996. CLICK HERE to download the full text.

Suh, S.-O., Blackwell, M., Kurtzman, C.P. & Lachance, M.-A. (2006). Phylogenetics of Saccharomycetales, the ascomycete yeasts. Mycologia, 98: 1006-1017. DOI: http://dx.doi.org/10.3852/mycologia.98.6.1006. CLICK HERE to download the full text.

Tehler, A., Little, D.P. & Farris, J.S. (2003). The full-length phylogenetic tree from 1551 ribosomal sequences of chitinous fungi, Fungi. Mycological Research, 107: 901-916. DOI: http://dx.doi.org/10.1017/S0953756203008128. CLICK HERE to download the full text.

Trinci, A.P.J., Davies, D.R., Gull, K., Lawrence, M.I., Bonde Nielsen, B., Rickers, A. & Theodorou, M.K. (1994). Anaerobic fungi in herbivorous animals. Mycological Research, 98: 129-152. DOI: http://dx.doi.org/10.1016/S0953-7562(09)80178-0. CLICK HERE to download the full text.

van der Giezen, M. (2002). Strange fungi with even stranger insides. Mycologist, 16: 129-131. DOI: http://dx.doi.org/10.1017/S0269915X02003051. CLICK HERE to download the complete text.

Webster, J. & Weber, R. (2007). Introduction to Fungi, 3rd ed. Cambridge University Press: Cambridge, UK. ISBN-10: 0521014832, ISBN-13: 978-0521014830.

White, M.M., James, T.Y., O'Donnell, K., Cafaro, M.J., Tanabe, Y. & Sugiyama, J. (2006). Phylogeny of the Zygomycota based on nuclear ribosomal sequence data. Mycologia, 98: 872-884. DOI: http://dx.doi.org/10.3852/mycologia.98.6.872. CLICK HERE to download the full text.

Updated December 16, 2016